High Performance Computing in Science and Engineering

Description

This book constitutes the thoroughly refereed post-conference proceedings of the Third International Conference on High Performance Computing in Science and Engineering, HPCSE 2017, held in Karolinka, Czech Republic, in May 2017. The 15 papers presented in this volume were carefully reviewed and selected from 20 submissions. The conference provides an international forum for exchanging ideas among researchers involved in scientific and parallel computing, including theory and applications, as well as applied and computational mathematics. The focus of HPCSE 2017 was on models, algorithms, and software tools which facilitate efficient and convenient utilization of modern parallel and distributed computing architectures, as well as on large-scale applications. Front Matter ....Pages I-X A High Arithmetic Intensity Krylov Subspace Method Based on Stencil Compiler Programs (Simplice Donfack, Patrick Sanan, Olaf Schenk, Bram Reps, Wim Vanroose)....Pages 1-18 Applications of Trace Estimation Techniques (Shashanka Ubaru, Yousef Saad)....Pages 19-33 Fourier Method for Approximating Eigenvalues of Indefinite Stekloff Operator (Yangqingxiang Wu, Ludmil Zikatanov)....Pages 34-46 Proportionality-Based Gradient Methods with Applications in Contact Mechanics (Zdeněk Dostál, Gerardo Toraldo, Marco Viola, Oldřich Vlach)....Pages 47-58 Schur Complement-Schwarz DD Preconditioners for Non-stationary Darcy Flow Problems (Radim Blaheta, Tomáš Luber, Jakub Kružík)....Pages 59-72 Relating Computed and Exact Entities in Methods Based on Lanczos Tridiagonalization (Tomáš Gergelits, Iveta Hnětynková, Marie Kubínová)....Pages 73-87 Software Tool for Cranial Orthosis Design (Milan Jaros, Tomas Karasek, Petr Strakos, Alena Vasatova)....Pages 88-100 Implementation of BM3D Filter on Intel Xeon Phi for Rendering in Blender Cycles (Milan Jaros, Petr Strakos, Tomas Karasek)....Pages 101-114 Investigating Convergence of Linear SVM Implemented in PermonSVM Employing MPRGP Algorithm (Jakub Kružík, Marek Pecha, Václav Hapla, David Horák, Martin Čermák)....Pages 115-129 Using ESPRESO as Linear Solver Library for Third Party FEM Tools for Solving Large Scale Problems (Ondřej Meca, Lubomír Říha, Alexandros Markopoulos, Tomáš Brzobohatý, Tomáš Kozubek)....Pages 130-143 MERIC and RADAR Generator: Tools for Energy Evaluation and Runtime Tuning of HPC Applications (Ondrej Vysocky, Martin Beseda, Lubomír Říha, Jan Zapletal, Michael Lysaght, Venkatesh Kannan)....Pages 144-159 Disc vs. Annulus: On the Bleaching Pattern Optimization for FRAP Experiments (Ctirad Matonoha, Štěpán Papáček, Stefan Kindermann)....Pages 160-173 Modeling and Simulation of Microalgae Growth in a Couette-Taylor Bioreactor (Štěpán Papáček, Ctirad Matonoha, Karel Petera)....Pages 174-187 Karhunen-Loéve Decomposition of Isotropic Gaussian Random Fields Using a Tensor Approximation of Autocovariance Kernel (Michal Béreš)....Pages 188-202 A Bayesian Approach to the Identification Problem with Given Material Interfaces in the Darcy Flow (Simona Domesová, Michal Béreš)....Pages 203-216 Back Matter ....Pages 217-217